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Unit 13: Mass Spectrometry, IR, and NMR Spectroscopy

How chemists know what they made: a fragmented molecular ion, a functional group's fingerprint, and a proton's neighbors counted from its own peak pattern.

9 topics · 33 questions

Each topic is a path, not a menu: work down it in order and every question builds on the one above. Click any of them to watch the answer draw itself.

Mass Spectrometry and the Molecular Ion

  1. How it worksHow does knocking one electron out of a molecule generate the molecular ion that mass spec actually detects?
  2. Worked exampleFind the molecular weight of a compound whose molecular ion peak appears at m/z 86 in its mass spectrum.
  3. Common mistakeWhy isn't the molecular ion peak always the tallest peak in a mass spectrum?
Your turn1 of 2
A compound's molecular ion peak appears at m/z 221 in its mass spectrum, formed by knocking one electron out of the neutral molecule to give a single positively charged radical cation. What is the compound's molecular weight?

Fragmentation Patterns in Mass Spectrometry

  1. How it worksHow does a molecular ion break apart preferentially at its weakest bonds to form stable cationic fragments?
  2. Worked exampleFind the mass of the fragment lost when a molecular ion at m/z 100 produces a base peak at m/z 57.
  3. Common mistakeWhy doesn't every bond in a molecule break with equal probability once fragmentation begins?
  4. Going furtherWhat happens to a fragmentation pattern when the molecular ion can lose a particularly stable fragment like a methyl radical?
Your turn1 of 2
A molecular ion appears at m/z 198 and its base peak, the major fragment, appears at m/z 58. What is the mass of the neutral fragment lost in forming that base peak?

IR Spectroscopy and Characteristic Absorptions

  1. How it worksHow does a bond's vibration absorb infrared light only at the specific frequency matching its own stretching motion?
  2. Worked exampleFind the functional group responsible for a strong broad absorption near 3300 wavenumbers alongside a sharp peak near 1710.
  3. Common mistakeWhy doesn't every peak in an IR spectrum correspond to a separate functional group in the molecule?
  4. Going furtherWhat happens to a carbonyl's stretching frequency when it moves from an open ketone into a strained four-membered ring?
Your turn1 of 2
An IR spectrum shows a strong, broad absorption near 3300 wavenumbers along with a sharp, strong peak near 1710 wavenumbers. What functional group is responsible for both together?

1H NMR Chemical Shift

  1. How it worksHow does nearby electron density shield a proton from the magnetic field and shift its signal upfield?
  2. Worked exampleFind which proton signal, near 2.1 ppm or near 9.7 ppm, belongs to an aldehyde hydrogen rather than a methyl beside a ketone.
  3. Common mistakeWhy doesn't a proton's chemical shift depend on how many other identical protons happen to sit on the same molecule?
Your turn1 of 2
Which proton signal, near 2.1 ppm or near 9.7 ppm, belongs to an aldehyde hydrogen rather than a methyl group beside a ketone?

1H NMR Integration

  1. How it worksHow does the number of protons producing a signal directly set the integrated area underneath that peak?
  2. Worked exampleFind the ratio of protons behind three NMR signals that integrate to 3, 2, and 1 in a molecule with six total protons.
  3. Going furtherWhat happens to an integration ratio when a molecule has a plane of symmetry that makes two sets of protons equivalent?
Your turn1 of 2
An NMR integration trace rises by 38 units for one signal out of a total rise of 118 units summed across the whole spectrum. If the compound's molecular formula shows 19 total protons, how many of those protons does this one signal represent?

Spin-Spin Splitting and the n+1 Rule

  1. How it worksHow does each neighboring proton's spin, up or down, add a tiny magnetic nudge that splits a signal into a doublet?
  2. How it worksHow does stacking up the up/down combinations from n neighboring protons build exactly n+1 peaks in a set ratio?
  3. Worked exampleFind the splitting pattern and peak ratio expected for a proton with three equivalent neighboring protons.
  4. Common mistakeWhy doesn't a proton ever split its own signal, only the protons sitting next to it?
  5. Going furtherWhat happens to a splitting pattern when a proton has two different kinds of neighbors instead of just one?
Your turn1 of 2
A proton has 5 equivalent neighboring protons on an adjacent carbon. According to the n+1 rule, into how many peaks does this proton's signal split?

Complex Splitting Patterns

  1. How it worksHow do two different coupling constants combine to split a single proton's signal into a doublet of doublets?
  2. Worked exampleFind the number of peaks expected for a proton coupled to two neighboring protons with different coupling constants.
  3. Going furtherWhat happens to a splitting pattern when the coupling constants to two different neighbors happen to be equal?
Your turn1 of 2
A proton is coupled to 2 neighboring proton(s) with one coupling constant and 2 neighboring proton(s) with a different coupling constant. Assuming the two coupling constants are different enough that no peaks overlap, how many total peaks appear in this proton's signal?

13C NMR Spectroscopy

  1. How it worksHow does proton decoupling erase the coupling between carbon and its attached hydrogens during the experiment?
  2. Worked exampleFind the number of distinct 13C signals expected for the symmetric molecule para-xylene.
  3. Common mistakeWhy doesn't the height of a 13C NMR peak reliably tell you how many carbons are producing that one signal?
  4. Ties togetherHow does combining the carbon count from 13C NMR with the proton count from 1H NMR narrow a structure down further?
Your turn1 of 2
Para-xylene (1,4-dimethylbenzene) is a highly symmetric molecule. How many distinct 13C NMR signals does it show?

Combining Spectra to Solve a Structure

  1. How it worksHow does combining a formula from mass spec, functional groups from IR, and connectivity from NMR triangulate one structure?
  2. Worked exampleFind the structure of a compound with formula C4H8O2, an IR peak at 1740, and 1H NMR signals at 4.1, 2.0, and 1.3 ppm.
  3. Worked exampleFind the structure of a compound with molecular ion at m/z 72, no IR carbonyl peak, and one 1H NMR signal at 0.9 ppm.
  4. Ties togetherHow does this structure-solving process pull together every spectroscopic tool from this entire unit into one workflow?
Your turn1 of 2
A compound has molecular formula C4H8O2, one degree of unsaturation, an IR peak at 1740 wavenumbers, and 1H NMR signals at 4.1, 2.0, and 1.3 ppm. What is the structure?